The detailed information of tRNA gene sequence


Sequence ID>WENV170671102
Genome IDLAHU01013869
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1099
End posion on genome 1028
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
taccgcataa
tRNA gene sequence 
GGGCTTGTAGATCAGGGGTAGATCGTTACGTTCGCAACGTAAAGGCCGCGGGTTCGAATC
CCGCCAAGTCCAtgc
Downstream region at tRNA end position 
gttcctgttc
Secondary structure (Cloverleaf model)
>WENV170671102	Ala	CGC
                   a      Atgc gttcctgttc
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     T - A
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     G
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    T - A
                    T - A
                    A - T
                    C - G
                    G - C
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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