The detailed information of tRNA gene sequence


Sequence ID>WENV170671111
Genome IDLAHU01014465
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 570
End posion on genome 657
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
atatttgtga
tRNA gene sequence 
GCGGGGGTTTCCAAGCCGGGTCAAAGGAGCAGGGTTGAGGGCCCTGTCGCGCAGGCGTTC
GCGGGTTCGAATCCCGTCCCCCGCACTA
Downstream region at tRNA end position 
atttctcttt
Secondary structure (Cloverleaf model)
>WENV170671111	Leu	GAG
                   a      ACTA atttctcttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
    C C G A        T      + | | | |     G
  G         A C C T       G C G G G     C
  G           | | |                 T T
  G         A G G A
    T C A A        G     TCGCGCAGGCGTTC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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