The detailed information of tRNA gene sequence


Sequence ID>WENV170671134
Genome IDLAHU01017654
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 806
End posion on genome 719
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cctcttgatc
tRNA gene sequence 
GCGGGGGTCGCCAAGCCAGGTCAACGGCGCTAGGTTCAGGGCCTAGTCTCGCAGGAGTTC
GTGGGTTCGAATCCCATCCCCCGCACCA
Downstream region at tRNA end position 
atttaacccg
Secondary structure (Cloverleaf model)
>WENV170671134	Leu	CAG
                   c      ACCA atttaacccg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
    C C G A        C      + | | | |     G
  A         A C C G       G T G G G     C
  G           | | |                 T T
  G         C G G C
    T C A A        G     TCTCGCAGGAGTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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