The detailed information of tRNA gene sequence


Sequence ID>WENV170671154
Genome IDLAHU01019743
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1113
End posion on genome 1036
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
ttccaaggtc
tRNA gene sequence 
CGGGATGTAGCGCAGTCCGGCTAGCGTACTTGAATGGGGTTCAAGTGGTCGCAGGTTCAA
ATCCTGTCATCCCGACCA
Downstream region at tRNA end position 
acactatcga
Secondary structure (Cloverleaf model)
>WENV170671154	Pro	GGG
                   c      ACCA acactatcga
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T G T C C     A
    C T G A        A      + | | | |     A
  C         C G C G       G C A G G     C
  G         | | | +                 T T
  G         G C G T
    C T A          A     TGGTC
                    C - G
                    T - A
                    T - A
                    G - C
                    A - T
                  A       T
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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