The detailed information of tRNA gene sequence


Sequence ID>WENV170671160
Genome IDLAHU01020727
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2492
End posion on genome 2407
Amino Acid Leu
Anticodon TAG
Upstream region at tRNA start position 
atttcgtaga
tRNA gene sequence 
GCGGGGGTTGCCAAGTGGTCAAAGGCGCAGGGCTTAGGACCCTGTCCTGCAGAGGTTCGT
GGGTTCGAATCCCATCCCCCGCACCA
Downstream region at tRNA end position 
attaaccctc
Secondary structure (Cloverleaf model)
>WENV170671160	Leu	TAG
                   a      ACCA attaaccctc
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
      T G A        T      + | | | |     G
    G       A C C G       G T G G G     C
    G         | | |                 T T
    T       A G G C
      C A A        G     TCCTGCAGAGGTTC
                    C - G
                    A - T
                    G - C
                    G - C
                    G - C
                  C       A
                  T       G
                    T A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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