The detailed information of tRNA gene sequence


Sequence ID>WENV170671184
Genome IDLAHU01023332
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2875
End posion on genome 2799
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
accagaaact
tRNA gene sequence 
GCCCAGGTAGCTCAGTCCGGGAGAGCGTCAGACTGAAGATCTGAACGTCCCCGGTTCGAA
TCCGGGTCTGGGCACTA
Downstream region at tRNA end position 
attttctttt
Secondary structure (Cloverleaf model)
>WENV170671184	Phe	GAA
                   t      ACTA attttctttt
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     G + T          T A
                    T     G G G C C     A
      T G A        A      | | | | |     G
    C       C T C G       C C C G G     C
    C       | | | |                 T T
    G       G A G C
      G G A        G     ACGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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