The detailed information of tRNA gene sequence


Sequence ID>WENV170671194
Genome IDLAHU01024334
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 617
End posion on genome 541
Amino Acid Pro
Anticodon GGG
Upstream region at tRNA start position 
tttttttggt
tRNA gene sequence 
CGGGCAATAGCGCAGTTGGTTAGCGTACAAGTCTGGGGGACTTGGGGTCCCCGGTTCAAA
TCCGGGTTGCCCGACTA
Downstream region at tRNA end position 
aaaaaacttt
Secondary structure (Cloverleaf model)
>WENV170671194	Pro	GGG
                   t      ACTA aaaaaacttt
                     C - G
                     G - C
                     G - C
                     G - C
                     C - G
                     A - T
                     A - T          T A
                    T     G G G C C     A
      T G A        A      | | | | |     A
    T       C G C G       C C C G G     C
    G       | | | +                 T T
    G       G C G T
      T T A        A     GGGTC
                    C - G
                    A - T
                    A - T
                    G - C
                    T - A
                  C       G
                  T       G
                    G G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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