The detailed information of tRNA gene sequence


Sequence ID>WENV170671200
Genome IDLAHU01025234
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1031
End posion on genome 958
Amino Acid Val
Anticodon TAC
Upstream region at tRNA start position 
taaaggggca
tRNA gene sequence 
GGGCCCGTGGTCTAGCTGGTTATGACATCGCCCTTACACGGCGGGGATCACGCGTTCGAA
CCGCGTCGGGCCCAtct
Downstream region at tRNA end position 
tttctttttc
Secondary structure (Cloverleaf model)
>WENV170671200	Val	TAC
                   a      Atct tttctttttc
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          C A
                    T     T G C G C     A
      C G A        G      | | | | |     G
    T       T C T G       A C G C G     C
    G         | | |                 T T
    G       T G A C
      T T A        A     GGATC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  C       C
                  T       A
                    T A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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