The detailed information of tRNA gene sequence


Sequence ID>WENV170671203
Genome IDLAHU01025490
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1486
End posion on genome 1412
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
atcattgcac
tRNA gene sequence 
GGTCCCATCGTCTAGTGGTTAGGACGCTGGCCTCTCACGCCGGAAACCGGGGTTCAAACC
CCCGTGGGACTACCA
Downstream region at tRNA end position 
aatcttactc
Secondary structure (Cloverleaf model)
>WENV170671203	Glu	CTC
                   c      ACCA aatcttactc
                     G + T
                     G - C
                     T - A
                     C - G
                     C - G
                     C - G
                     A - T          C A
                    T     G C C C C     A
      T G A        C      | | | | |     A
    G       T C T G       C G G G G     C
    G       + | | |                 T T
    T       G G A C
      T A          G     AAAC
                    C - G
                    T + G
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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