The detailed information of tRNA gene sequence


Sequence ID>WENV170671241
Genome IDLAHU01028911
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 841
End posion on genome 913
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
gacctattga
tRNA gene sequence 
GCCCAAGTAGCTCAGTTGGGAGAGCGTCAGACTGAAGATCTGAATGTCCCCGGTTCGAGT
CCGGGTTTGGGCAtcc
Downstream region at tRNA end position 
aattagccct
Secondary structure (Cloverleaf model)
>WENV170671241	Phe	GAA
                   a      Atcc aattagccct
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     A - T
                     G + T          T G
                    T     G G G C C     A
      T G A        A      | | | | |     G
    T       C T C G       C C C G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     ATGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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