The detailed information of tRNA gene sequence


Sequence ID>WENV170671254
Genome IDLAHU01030203
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 7763
End posion on genome 7686
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tagagcagtt
tRNA gene sequence 
GCTGCTATAGTGTAGTCCGGCCAATCATGCGGGCCTCTCACGCCCGCGACTGGGGTTCGA
ATCCCCATAGCAGCACTA
Downstream region at tRNA end position 
ttttctctct
Secondary structure (Cloverleaf model)
>WENV170671254	Glu	CTC
                   t      ACTA ttttctctct
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     A C C C C     A
    C T G A        A      | | | | |     G
  C         T G T G       T G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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