The detailed information of tRNA gene sequence


Sequence ID>WENV170671256
Genome IDLAHU01030255
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2689
End posion on genome 2615
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
gatctcgttc
tRNA gene sequence 
GGGGTAGTAGGGTAGCCTGGTCCATCCTAGAGCGTTTGGGACGCTTTGACGGCAGTTCGA
ATCTGCCCTACCCCAtga
Downstream region at tRNA end position 
gcatggacag
Secondary structure (Cloverleaf model)
>WENV170671256	Pro	TGG
                   c      Atga gcatggacag
                     G - C
                     G - C
                     G - C
                     G - C
                     T - A
                     A - T
                     G - C          T A
                    T     C C G T C     A
    C C G A        A      | | | | |     G
  T         T G G G       G G C A G     C
  G           | | +                 T T
  G         T C C T
    T C C A        A     TGAC
                    G + T
                    A - T
                    G - C
                    C - G
                    G - C
                  T       A
                  T       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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