The detailed information of tRNA gene sequence


Sequence ID>WENV170671259
Genome IDLAHU01030385
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 150
End posion on genome 75
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
aggcgcaatt
tRNA gene sequence 
GGGCGCGTGGCCTAGTCAGGATAAGGCGGCAGCCTCCTAAGCTGTAGATCGGGGGTTCGA
ATCCCTCTGCGCCCGCtt
Downstream region at tRNA end position 
gttttttttt
Secondary structure (Cloverleaf model)
>WENV170671259	Arg	CCT
                   t      GCtt gttttttttt
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     C - G
                     G + T          T A
                    T     C T C C C     A
    C T G A        G      | + | | |     G
  A         T C C G       G G G G G     C
  G         | | | |                 T T
  G         A G G C
    A T A          G     AGATC
                    G + T
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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