The detailed information of tRNA gene sequence


Sequence ID>WENV170671272
Genome IDLAHU01031988
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 723
End posion on genome 648
Amino Acid Glu
Anticodon CTC
Upstream region at tRNA start position 
tagagcagtt
tRNA gene sequence 
GCTGCTATAGTGTAGTCCGGCCAATCATGCGGGCCTCTCACGCCCGCGACTGGGGTTCGA
ATCCCCATAGCAGCACtt
Downstream region at tRNA end position 
ttactggatt
Secondary structure (Cloverleaf model)
>WENV170671272	Glu	CTC
                   t      ACtt ttactggatt
                     G - C
                     C - G
                     T - A
                     G - C
                     C - G
                     T - A
                     A - T          T A
                    T     A C C C C     A
    C T G A        A      | | | | |     G
  C         T G T G       T G G G G     C
  G           | | +                 T T
  G         T C A T
    C C A A        G     CGAC
                    C - G
                    G - C
                    G - C
                    G - C
                    C - G
                  C       C
                  T       A
                    C T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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