The detailed information of tRNA gene sequence


Sequence ID>WENV170671290
Genome IDLAHU01034486
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 430
End posion on genome 504
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
cacagattcc
tRNA gene sequence 
GCCCCTATAGCTCAGCAGGATAGAGCAGCGGTTTCCTAAACCGTTGGTCGCACGTTCGAA
TCGTGCTAGGGGCACtc
Downstream region at tRNA end position 
tagagcnnnn
Secondary structure (Cloverleaf model)
>WENV170671290	Arg	CCT
                   c      ACtc tagagcnnnn
                     G - C
                     C - G
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T          T A
                    T     C G T G C     A
      C G A        A      | | | | |     G
    A       C T C G       G C A C G     C
    G       | | | |                 T T
    G       G A G C
      A T A        A     TGGTC
                    G + T
                    C - G
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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