The detailed information of tRNA gene sequence


Sequence ID>WENV170671322
Genome IDLAHU01038637
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 380
End posion on genome 455
Amino Acid Trp
Anticodon CCA
Upstream region at tRNA start position 
gatatgttgc
tRNA gene sequence 
AGGACAGTAGTTCAACTGGTAGAGCACCGGTCTCCAAAACCGGGGGTTGCGGGTTCGATT
CCTGCCTGTCCTGCCA
Downstream region at tRNA end position 
catttttggg
Secondary structure (Cloverleaf model)
>WENV170671322	Trp	CCA
                   c      GCCA catttttggg
                     A - T
                     G - C
                     G - C
                     A - T
                     C - G
                     A - T
                     G - C          T T
                    T     C G T C C     A
      C A A        A      | | + | |     G
    T       C T T G       G C G G G     C
    G       | | + |                 T T
    G       G A G C
      T A          A     GGGTT
                    C - G
                    C - G
                    G - C
                    G - C
                    T - A
                  C       A
                  T       A
                    C C A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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