The detailed information of tRNA gene sequence


Sequence ID>WENV170671353
Genome IDLAHU01041890
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 124
End posion on genome 54
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
aaggcagttc
tRNA gene sequence 
GCATCGATGGTCTAGTGGCATGACTTTGGCCTTCCAAGCCAATAGCCCGGGTTCAATTCC
CGGTCGATGCAtcg
Downstream region at tRNA end position 
ggcttgtggt
Secondary structure (Cloverleaf model)
>WENV170671353	Gly	TCC
                   c      Atcg ggcttgtggt
                     G - C
                     C - G
                     A - T
                     T - A
                     C - G
                     G - C
                     A - T          T T
                    T     G G C C C     A
        G A        G      | | | | |     A
      T     T C T G       C C G G G     C
      G       | | |                 T T
      G     T G A C
        C A        T     TAGC
                    T - A
                    T - A
                    G - C
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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