The detailed information of tRNA gene sequence


Sequence ID>WENV170671364
Genome IDLAHU01043031
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2132
End posion on genome 2207
Amino Acid Thr
Anticodon CGT
Upstream region at tRNA start position 
actatttgtG
tRNA gene sequence 
GCCTCGGTGGCTCAGTCTGGTAGAGCGCGTGACTCGTAATCTCGTGGTCGGGGGTTCAAA
TCCCCCCCGGGGCTTta
Downstream region at tRNA end position 
tttttaataa
Secondary structure (Cloverleaf model)
>WENV170671364	Thr	CGT
                   G      TTta tttttaataa
                     G - C
                     C - G
                     C - G
                     T + G
                     C - G
                     G - C
                     G - C          T A
                    T     C C C C C     A
      T G A        G      | | | | |     A
    C       C T C G       G G G G G     C
    T       | | | |                 T T
    G       G A G C
      G T A        G     TGGTC
                    C - G
                    G - C
                    T   T
                    G - C
                    A - T
                  C       A
                  T       A
                    C G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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