The detailed information of tRNA gene sequence


Sequence ID>WENV170671378
Genome IDLAHU01044323
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 20
End posion on genome 107
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
tagcctcaaT
tRNA gene sequence 
GCGGGGGTCGCCCAGCCAGGTCAAAGGCGCTAGATTCAGAGTCTAGTCTCGTAGGAGTTC
GTGGGTTCGAATCCCATCCCCCGCATCg
Downstream region at tRNA end position 
gataattttt
Secondary structure (Cloverleaf model)
>WENV170671378	Leu	CAG
                   T      ATCg gataattttt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
    C C G A        C      + | | | |     G
  A         C C C G       G T G G G     C
  G           | | |                 T T
  G         A G G C
    T C A A        G     TCTCGTAGGAGTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    A - T
                  T       G
                  T       A
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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