The detailed information of tRNA gene sequence


Sequence ID>WENV170671385
Genome IDLAHU01044941
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1332
End posion on genome 1261
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
cgttccaacc
tRNA gene sequence 
GGGCTCGTAGATCAGGGGTAGATCGCTACCTTCGCAAGGTAGAGGCCGCGGGTTCGAATC
CCGCCGAGTCCAtga
Downstream region at tRNA end position 
gcatcctctt
Secondary structure (Cloverleaf model)
>WENV170671385	Ala	CGC
                   c      Atga gcatcctctt
                     G - C
                     G - C
                     G + T
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     C G C C C     A
        G A        A      | | | | |     G
      G     C T A G       G C G G G     C
      G     | | | |                 T T
      G     G A T C
        T A        G     AGGCC
                    C - G
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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