The detailed information of tRNA gene sequence


Sequence ID>WENV170671398
Genome IDLAHU01046677
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 680
End posion on genome 604
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
attgtaaacc
tRNA gene sequence 
GCTGGATTAGCTCAGTTGGTTAGAGCACATTCATGGTAAGAATGAGGTCCTGAGTTCGAC
TCTCAGATCCAGCTCCA
Downstream region at tRNA end position 
tatatattcc
Secondary structure (Cloverleaf model)
>WENV170671398	Thr	GGT
                   c      TCCA tatatattcc
                     G - C
                     C - G
                     T - A
                     G - C
                     G - C
                     A - T
                     T - A          T C
                    T     G A C T C     A
      T G A        A      | | | | |     G
    T       C T C G       C T G A G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTC
                    C - G
                    A - T
                    T - A
                    T - A
                    C - G
                  A       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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