The detailed information of tRNA gene sequence


Sequence ID>WENV170671404
Genome IDLAHU01046962
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1596
End posion on genome 1521
Amino Acid Arg
Anticodon CCT
Upstream region at tRNA start position 
caaatttaaa
tRNA gene sequence 
GGGCCCGTAGCCTAGTCTGGATAGGGCATCAGACTCCTAATCTGAAGGTCCGGGGTTCAA
ATCCCCGCGGGTCCGCtg
Downstream region at tRNA end position 
ctatttttaa
Secondary structure (Cloverleaf model)
>WENV170671404	Arg	CCT
                   a      GCtg ctatttttaa
                     G - C
                     G - C
                     G + T
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     G C C C C     A
    C T G A        A      | | | | |     A
  T         T C C G       C G G G G     C
  G         + | | |                 T T
  G         G G G C
    A T A          A     AGGTC
                    T - A
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       A
                    C C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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