The detailed information of tRNA gene sequence


Sequence ID>WENV170671419
Genome IDLAHU01050589
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 415
End posion on genome 490
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
acgtcacctT
tRNA gene sequence 
GGGCTCGTGGTCTAGTTGGTTATGACGTCGCCTTGACATGGCGGAGGTCCTGAGTTCGAA
TCTCAGCGAGCCCATga
Downstream region at tRNA end position 
gggaggaaac
Secondary structure (Cloverleaf model)
>WENV170671419	Val	GAC
                   T      ATga gggaggaaac
                     G - C
                     G - C
                     G - C
                     C - G
                     T - A
                     C - G
                     G - C          T A
                    T     G A C T C     A
      T G A        G      | | | | |     G
    T       T C T G       C T G A G     C
    G         | | |                 T T
    G       T G A C
      T T A        G     AGGTC
                    T + G
                    C - G
                    G - C
                    C - G
                    C - G
                  T       T
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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