The detailed information of tRNA gene sequence


Sequence ID>WENV170671428
Genome IDLAHU01053594
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 137
End posion on genome 51
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cctgtaagcg
tRNA gene sequence 
GCCCAGATGGCGAAATTGGTAGACGCGCTAGTTTCAGGGACTAGTGTCAGCAATGATGTG
CAGGTTCGAGTCCTGTTCTGGGCACCA
Downstream region at tRNA end position 
ccaaccacgc
Secondary structure (Cloverleaf model)
>WENV170671428	Leu	CAG
                   g      ACCA ccaaccacgc
                     G - C
                     C - G
                     C - G
                     C - G
                     A - T
                     G - C
                     A - T          T G
                    T     T G T C C     A
      T A A        G      + | | | |     G
    T       A G C G       G C A G G     C
    G         | | |                 T T
    G       A C G C
      T A G        G     TGTCAGCAATGATGT
                    C - G
                    T - A
                    A - T
                    G - C
                    T - A
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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