The detailed information of tRNA gene sequence


Sequence ID>WENV170671435
Genome IDLAHU01054865
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 81
End posion on genome 156
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
tttttttcac
tRNA gene sequence 
GGGCCCGTAGCTTAGTCCGGTCAGAGCGCCCGGCTCATAACCGGGCGGTCATGCGTTCAA
ATCGCATCGGGCCCACtt
Downstream region at tRNA end position 
ttgaactatt
Secondary structure (Cloverleaf model)
>WENV170671435	Met	CAT
                   c      ACtt ttgaactatt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T A C G C     A
    C T G A        A      | | | | |     A
  C         T T C G       A T G C G     C
  G         + | | |                 T T
  G         G A G C
    T C A          G     CGGTC
                    C - G
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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