The detailed information of tRNA gene sequence


Sequence ID>WENV170671442
Genome IDLAHU01055530
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1433
End posion on genome 1518
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
ttaaatcatt
tRNA gene sequence 
GCAGGGGTGGCCCAGCCTGGTACGGCGTGGGACTGCTAATCCCATGATCCTTTGGATCGC
GCGGGTTCGAATCCCGTCCCCTGCGCtt
Downstream region at tRNA end position 
tattttaaaa
Secondary structure (Cloverleaf model)
>WENV170671442	Ser	GCT
                   t      GCtt tattttaaaa
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     G
    C       C C C G       G C G G G     C
    T         | | |                 T T
    G       C G G C
      G T A        G     TGATCCTTTGGATCGC
                    T - A
                    G - C
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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