The detailed information of tRNA gene sequence


Sequence ID>WENV170671463
Genome IDLAHU01061877
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 99
End posion on genome 170
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
aaatctttaa
tRNA gene sequence 
GGGCCGGTGGTCTAGGGGTATGATACCTCGCTCACACCGAGGTGATCAGGAGTTCGAATC
TCCTCCGGCCCAttt
Downstream region at tRNA end position 
cccttttttg
Secondary structure (Cloverleaf model)
>WENV170671463	Val	CAC
                   a      Attt cccttttttg
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T C C T C     A
        G A        G      | | | | |     G
      G     T C T G       A G G A G     C
      G       | | +                 T T
      G     T G A T
        T A        A     TGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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