The detailed information of tRNA gene sequence


Sequence ID>WENV170671477
Genome IDLAHU01064008
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 504
End posion on genome 430
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
tcgcagcagc
tRNA gene sequence 
GGGCGATTGGCTCAGTGGTAGAGCGCCTCGTTCACACCGAGGAGGTCACTGGTTCGAACC
CAGTATCGCCCACCC
Downstream region at tRNA end position 
taggtgacga
Secondary structure (Cloverleaf model)
>WENV170671477	Val	CAC
                   c      ACCC taggtgacga
                     G - C
                     G - C
                     G - C
                     C - G
                     G - C
                     A - T
                     T - A          C A
                    T     T G A C C     A
        G A        G      | | | | |     G
      T     C T C G       A C T G G     C
      G     | | | |                 T T
      G     G A G C
        T A        G     AGGTC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  T       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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