The detailed information of tRNA gene sequence


Sequence ID>WENV170671519
Genome IDLAHU01071802
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 814
End posion on genome 729
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position 
gagattgcct
tRNA gene sequence 
GTTGAGGTAGCCAAGCCTGGTATGGCGCAGGTTTGCTAAACCTGTGTCCCCCTGGGACTC
GAGGGTTCAAATCCCTCCCTCAGCGCtt
Downstream region at tRNA end position 
cgaatacatc
Secondary structure (Cloverleaf model)
>WENV170671519	Ser	GCT
                   t      GCtt cgaatacatc
                     G - C
                     T + G
                     T - A
                     G - C
                     A - T
                     G - C
                     G - C          T A
                    T     C T C C C     A
      C G A        A      | | | | |     A
    C       A C C G       G A G G G     C
    T       | | | |                 T T
    G       T G G C
      G T A        G     TGTCCCCCTGGGACTC
                    C - G
                    A - T
                    G - C
                    G - C
                    T - A
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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