The detailed information of tRNA gene sequence


Sequence ID>WENV170671555
Genome IDLAHU01085257
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1642
End posion on genome 1565
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
tgatccaccT
tRNA gene sequence 
GCCTTAGTAGCTCAGTTTGGGAGAGCGCCAGACTGAAGATCTGGTTGTCCCCGGTTCAAA
TCCGGGCTGAGGCATCC
Downstream region at tRNA end position 
gtattatcgg
Secondary structure (Cloverleaf model)
>WENV170671555	Phe	GAA
                   T      ATCC gtattatcgg
                     G - C
                     C - G
                     C - G
                     T - A
                     T + G
                     A - T
                     G - C          T A
                    T     G G G C C     A
      T G A        A      | | | | |     A
    T       C T C G       C C C G G     C
    T       | | | |                 T T
    G       G A G C
      G G A        G     TTGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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