The detailed information of tRNA gene sequence


Sequence ID>WENV170671565
Genome IDLAHU01087301
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 3432
End posion on genome 3360
Amino Acid Thr
Anticodon GGT
Upstream region at tRNA start position 
ttaaattact
tRNA gene sequence 
GCCCTAGTGGCTCAGCCGGTAGAGCGATACCTTGGTAAGGTATAGGCCGGGGGTTCGAAT
CCCCCCTAGGGCTtat
Downstream region at tRNA end position 
aaacattagt
Secondary structure (Cloverleaf model)
>WENV170671565	Thr	GGT
                   t      Ttat aaacattagt
                     G - C
                     C - G
                     C - G
                     C - G
                     T - A
                     A - T
                     G - C          T A
                    T     C C C C C     A
      C G A        G      | | | | |     G
    C       C T C G       G G G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          G     AGGCC
                    A - T
                    T - A
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G G T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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