The detailed information of tRNA gene sequence


Sequence ID>WENV170671588
Genome IDLAHU01095375
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1114
End posion on genome 1185
Amino Acid Val
Anticodon GAC
Upstream region at tRNA start position 
atggacgacg
tRNA gene sequence 
GGGCCCGTGGTCTAGGGGTATGATACCTCCCTGACACGGAGGTGATCACGAGTTCGAATC
TCGTCGGGCCCAttt
Downstream region at tRNA end position 
tgccgtggta
Secondary structure (Cloverleaf model)
>WENV170671588	Val	GAC
                   g      Attt tgccgtggta
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     C - G
                     G - C          T A
                    T     T G C T C     A
        G A        G      | | | | |     G
      G     T C T G       A C G A G     C
      G       | | +                 T T
      G     T G A T
        T A        A     TGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    C - G
                  C       C
                  T       A
                    G A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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