The detailed information of tRNA gene sequence


Sequence ID>WENV170671589
Genome IDLAHU01095375
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1190
End posion on genome 1263
Amino Acid Phe
Anticodon GAA
Upstream region at tRNA start position 
ggcccatttt
tRNA gene sequence 
GCCGTGGTAGTTCAGTTGGGAGAACGCCAGACTGAAGATCTGGATGTCGCTGGTTCAAGT
CCGGCCCACGGCACtt
Downstream region at tRNA end position 
aaaattcatt
Secondary structure (Cloverleaf model)
>WENV170671589	Phe	GAA
                   t      ACtt aaaattcatt
                     G - C
                     C - G
                     C - G
                     G - C
                     T - A
                     G - C
                     G - C          T G
                    T     C G G C C     A
      T G A        A      | | + | |     A
    T       C T T G       G C T G G     C
    G       | | | |                 T T
    G       G A A C
      G A          G     ATGTC
                    C - G
                    C - G
                    A - T
                    G - C
                    A - T
                  C       A
                  T       G
                    G A A
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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