The detailed information of tRNA gene sequence


Sequence ID>WENV170671601
Genome IDLAHU01101324
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 699
End posion on genome 625
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ggtaaatgaT
tRNA gene sequence 
GGGCCTATAGCTCAGCTGGAAGAGCCACCGGCTCATAACCGGTAGGTCCCTGGTTCGAAC
CCAGGTGGGCCCATat
Downstream region at tRNA end position 
taatcttggt
Secondary structure (Cloverleaf model)
>WENV170671601	Met	CAT
                   T      ATat taatcttggt
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     T + G
                     A - T          C A
                    T     G G A C C     A
      C G A        A      | | | | |     G
    T       C T C G       C C T G G     C
    G       | | | |                 T T
    G       G A G C
      A A          C     AGGTC
                    A - T
                    C - G
                    C - G
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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