The detailed information of tRNA gene sequence


Sequence ID>WENV170671615
Genome IDLAHU01106292
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 2815
End posion on genome 2888
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
ccctgtatca
tRNA gene sequence 
GGACGCATAGCTCAGTTGGTTAGAGTGCCGTGTTCACATCGCGGAGGTCGCAGGTTCGAT
TCCTGCTGCGTCCAttt
Downstream region at tRNA end position 
tatatccact
Secondary structure (Cloverleaf model)
>WENV170671615	Val	CAC
                   a      Attt tatatccact
                     G - C
                     G - C
                     A - T
                     C - G
                     G - C
                     C - G
                     A - T          T T
                    T     C G T C C     A
      T G A        A      | | | | |     G
    T       C T C G       G C A G G     C
    G       | | | +                 T T
    G       G A G T
      T T A        G     AGGTC
                    C - G
                    C - G
                    G - C
                    T + G
                    G - C
                  T       T
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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