The detailed information of tRNA gene sequence


Sequence ID>WENV170671626
Genome IDLAHU01110038
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1585
End posion on genome 1508
Amino Acid Pro
Anticodon CGG
Upstream region at tRNA start position 
aaaaaaagat
tRNA gene sequence 
CGGGATGTAGCGCAGACCGGTTAGCGCGCTCGGTTCGGGACCGAGAAGTCGGAGGTTCAA
ATCCTCTCATCCCGACCA
Downstream region at tRNA end position 
ttattttaaa
Secondary structure (Cloverleaf model)
>WENV170671626	Pro	CGG
                   t      ACCA ttattttaaa
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     T - A
                     G - C          T A
                    T     T C T C C     A
    C A G A        A      + | | | |     A
  C         C G C G       G G A G G     C
  G         | | | |                 T T
  G         G C G C
    T T A          G     AAGTC
                    C - G
                    T - A
                    C - G
                    G - C
                    G - C
                  T       A
                  T       G
                    C G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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