The detailed information of tRNA gene sequence


Sequence ID>WENV170671629
Genome IDLAHU01110575
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 427
End posion on genome 503
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
aactaaatac
tRNA gene sequence 
GGAGCTGTGGTGTAGTGGCCTAACATGCCTGCCTGTCACGCAGGAGAACGCGGGTTCGAC
TCCCGTCAGCTCCGCCA
Downstream region at tRNA end position 
ttttttttgc
Secondary structure (Cloverleaf model)
>WENV170671629	Asp	GTC
                   c      GCCA ttttttttgc
                     G - C
                     G - C
                     A - T
                     G - C
                     C - G
                     T - A
                     G - C          T C
                    T     T G C C C     A
      T G A        G      + | | | |     G
    G       T G T G       G C G G G     C
    G       | | | +                 T T
    C       A C A T
      C T A        G     AGAAC
                    C - G
                    C - G
                    T - A
                    G - C
                    C - G
                  C       C
                  T       A
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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