The detailed information of tRNA gene sequence


Sequence ID>WENV170671676
Genome IDLAHU01126987
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 81
End posion on genome 168
Amino Acid Leu
Anticodon CAG
Upstream region at tRNA start position 
cctcttgatc
tRNA gene sequence 
GCGGGGGTCGCCAAGCCAGGTCAACGGCGCTAGGTTCAGGGCCTAGTCTCGCAGGAGTTC
GTGGGTTCGAATCCCATCCCCCGCACCA
Downstream region at tRNA end position 
atttacttgt
Secondary structure (Cloverleaf model)
>WENV170671676	Leu	CAG
                   c      ACCA atttacttgt
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T A C C C     A
    C C G A        C      + | | | |     G
  A         A C C G       G T G G G     C
  G           | | |                 T T
  G         C G G C
    T C A A        G     TCTCGCAGGAGTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    C A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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