The detailed information of tRNA gene sequence


Sequence ID>WENV170671694
Genome IDLAHU01132750
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 617
End posion on genome 544
Amino Acid Gly
Anticodon TCC
Upstream region at tRNA start position 
ttcggggatt
tRNA gene sequence 
GCGGGTGTAGCTCAATGGTAGAGCTCCAGCCTTCCAAGCTGGCTACGTGGGTTCGATTCC
CATCACCCGCTCCA
Downstream region at tRNA end position 
tactgcttcg
Secondary structure (Cloverleaf model)
>WENV170671694	Gly	TCC
                   t      TCCA tactgcttcg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     T - A
                     G - C          T T
                    T     T A C C C     A
        A A        A      + | | | |     G
      T     C T C G       G T G G G     C
      G     | | | |                 T T
      G     G A G C
        T A        T     CTAC
                    C - G
                    C - G
                    A - T
                    G - C
                    C - G
                  C       A
                  T       A
                    T C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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