The detailed information of tRNA gene sequence


Sequence ID>WENV170671696
Genome IDLAHU01133190
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1100
End posion on genome 1174
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
gtgatagtac
tRNA gene sequence 
AGCGGGGTGGGGTAGTCTGGTGATCCCGCGGGGCTCATAACCCCGAGAGCCCTAGTTCAA
ATCTAGGCCCCGCTAttt
Downstream region at tRNA end position 
atttttcaat
Secondary structure (Cloverleaf model)
>WENV170671696	Met	CAT
                   c      Attt atttttcaat
                     A - T
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     G G A T C     A
    C T G A        G      | | | | |     A
  T         T G G G       C C T A G     C
  G           | | |                 T T
  G         T C C C
    T G A          G     AGAGC
                    C - G
                    G - C
                    G - C
                    G - C
                    G - C
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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