The detailed information of tRNA gene sequence


Sequence ID>WENV170671715
Genome IDLAHU01137622
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 3293
End posion on genome 3219
Amino Acid Val
Anticodon CAC
Upstream region at tRNA start position 
catggccaaT
tRNA gene sequence 
GGGCCGGTGGTCTAGGGGTATGATACCTCGCTCACACCGAGGTGATCAGGAGTTCGAATC
TCCTCCGGCCCATCg
Downstream region at tRNA end position 
aaaaaaaaac
Secondary structure (Cloverleaf model)
>WENV170671715	Val	CAC
                   T      ATCg aaaaaaaaac
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C
                     G - C          T A
                    T     T C C T C     A
        G A        G      | | | | |     G
      G     T C T G       A G G A G     C
      G       | | +                 T T
      G     T G A T
        T A        A     TGATC
                    C - G
                    C - G
                    T - A
                    C - G
                    G - C
                  C       C
                  T       A
                    C A C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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