The detailed information of tRNA gene sequence


Sequence ID>WENV170671738
Genome IDLAHU01143681
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 1050
End posion on genome 975
Amino Acid Lys
Anticodon CTT
Upstream region at tRNA start position 
taggtcaacT
tRNA gene sequence 
GGGTCTGTAGCTTAGTTCGGCATAGCGGCGGACTCTTAATCCGCAGGTCAAGGGTTCAAA
TCCCTTCAGGCCCGTtc
Downstream region at tRNA end position 
tccctgtcct
Secondary structure (Cloverleaf model)
>WENV170671738	Lys	CTT
                   T      GTtc tccctgtcct
                     G - C
                     G - C
                     G - C
                     T + G
                     C - G
                     T - A
                     G - C          T A
                    T     T T C C C     A
      T G A        A      | | | | |     A
    T       T T C G       A A G G G     C
    C         | | |                 T T
    G       T A G C
      G C A        G     AGGTC
                    G - C
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       A
                    C T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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