The detailed information of tRNA gene sequence


Sequence ID>WENV170671753
Genome IDLAHU01153673
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 29
End posion on genome 104
Amino Acid Pro
Anticodon TGG
Upstream region at tRNA start position 
tgtaggtcgT
tRNA gene sequence 
GGGGCCATAGGGTAGCCTGGCCATCCTAGGAGACTGGGGGTCTTCTGACCTGCGTTCAAA
TCGCAGTGGCCCCATtc
Downstream region at tRNA end position 
tatttctgtc
Secondary structure (Cloverleaf model)
>WENV170671753	Pro	TGG
                   T      ATtc tatttctgtc
                     G - C
                     G - C
                     G - C
                     G - C
                     C - G
                     C - G
                     A - T          T A
                    T     G A C G C     A
      C G A        A      | | | | |     A
    C       T G G G       C T G C G     C
    T       | + | |                 T T
    G       A T C C
      G C C        T     CTGAC
                    A - T
                    G + T
                    G - C
                    A - T
                    G   G
                  A       G
                  C       G
                    T G G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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