The detailed information of tRNA gene sequence


Sequence ID>WENV170671776
Genome IDLAHU01163177
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 136
End posion on genome 63
Amino Acid Gly
Anticodon GCC
Upstream region at tRNA start position 
ccctgaattt
tRNA gene sequence 
GCGGGAGTAGCTCAGTTGGTAGAGCATAACCTTGCCAAGGTTAGGGTCGCGGGTTCGAGT
CCCGTCTCCCGCTCag
Downstream region at tRNA end position 
ttaaaaaagg
Secondary structure (Cloverleaf model)
>WENV170671776	Gly	GCC
                   t      TCag ttaaaaaagg
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T
                     G - C          T G
                    T     T G C C C     A
      T G A        A      + | | | |     G
    T       C T C G       G C G G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     GGGTC
                    T - A
                    A - T
                    A - T
                    C - G
                    C - G
                  T       A
                  T       A
                    G C C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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