The detailed information of tRNA gene sequence


Sequence ID>WENV170671812
Genome IDLAHU01176810
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 470
End posion on genome 545
Amino Acid Lys
Anticodon TTT
Upstream region at tRNA start position 
gcgcctcttt
tRNA gene sequence 
GGGTCGTTAGCTCAGTCGGTAGAGCAGTTGGCTTTTAACCAATTGGTCGCAGGTTCGAAT
CCCGCACGACCCACCA
Downstream region at tRNA end position 
tagtaagaaa
Secondary structure (Cloverleaf model)
>WENV170671812	Lys	TTT
                   t      ACCA tagtaagaaa
                     G - C
                     G - C
                     G - C
                     T - A
                     C - G
                     G - C
                     T - A          T A
                    T     C G C C C     A
      T G A        A      | |   | |     G
    C       C T C G       G C A G G     C
    G       | | | |                 T T
    G       G A G C
      T A          A     TGGTC
                    G + T
                    T - A
                    T - A
                    G - C
                    G - C
                  C       A
                  T       A
                    T T T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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