The detailed information of tRNA gene sequence


Sequence ID>WENV170671819
Genome IDLAHU01179837
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 47
End posion on genome 132
Amino Acid Ser
Anticodon GCT
Upstream region at tRNA start position
catttttcat
tRNA gene sequence
GACGAGATAGCCAAGCCCGGTATGGCGCAGGATTGCTAATCCTGTGGTGCTACGCACTTC
GGGGGTTCGAATCCCCCTCTCGTCGCtt
Downstream region at tRNA end position
aattttatga
Secondary structure (Cloverleaf model)
>WENV170671819	Ser	GCT
                   t      GCtt aattttatga
                     G - C
                     A - T
                     C - G
                     G - C
                     A - T
                     G - C
                     A - T          T A
                    T     C C C C C     A
      C G A        A      | | | | |     G
    C       A C C G       G G G G G     C
    C       | | | |                 T T
    G       T G G C
      G T A        G     TGGTGCTACGCACTTC
                    C - G
                    A - T
                    G - C
                    G - C
                    A - T
                  T       A
                  T       A
                    G C T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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