The detailed information of tRNA gene sequence


Sequence ID>WENV170671870
Genome IDLAHU01203448
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 116
End posion on genome 43
Amino Acid Met
Anticodon CAT
Upstream region at tRNA start position 
ttgaaaacat
tRNA gene sequence 
CGCGGGATGGAGGAATGGCACCTCACCGGGCTCATAATCCGGGGGTCCTGGTTCGAGTCC
AGGTCCCGCAACCA
Downstream region at tRNA end position 
aaattatcag
Secondary structure (Cloverleaf model)
>WENV170671870	Met	CAT
                   t      ACCA aaattatcag
                     C   A
                     G - C
                     C - G
                     G - C
                     G - C
                     G - C
                     A - T          T G
                    T     G G A C C     A
        A A        G      | | | | |     G
      T     G G A G       C C T G G     C
      G     | | | |                 T T
      G     C C T C
        C A        A     GGGT
                    C - G
                    C - G
                    G - C
                    G - C
                    G + T
                  C       A
                  T       A
                    C A T
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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