The detailed information of tRNA gene sequence


Sequence ID>WENV170671877
Genome IDLAHU01204656
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 127
End posion on genome 52
Amino Acid Ala
Anticodon CGC
Upstream region at tRNA start position 
ggccggattt
tRNA gene sequence 
GGGGGCGTAGCTCAGCTGGGAGAGCGTCGCGTTCGCAATGCGAAGGTCAGGGGTTCGATC
CCCCTCGCCTCCACCA
Downstream region at tRNA end position 
acaaaaacaa
Secondary structure (Cloverleaf model)
>WENV170671877	Ala	CGC
                   t      ACCA acaaaaacaa
                     G - C
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     G - C          C T
                    T     T C C C C     A
      C G A        A      | | | | |     G
    T       C T C G       A G G G G     C
    G       | | | |                 T T
    G       G A G C
      G A          G     AGGTC
                    T - A
                    C - G
                    G - C
                    C - G
                    G + T
                  T       A
                  T       A
                    C G C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

Comment
---
Input Comment
E-mail
Comment
Input this 5 letters

Attention:
When your comment is judged as an irrelevant one by the administrator,
your comment will be deleted by the administrator.

BACK