The detailed information of tRNA gene sequence


Sequence ID>WENV170671892
Genome IDLAHU01210428
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 280
End posion on genome 355
Amino Acid Asp
Anticodon GTC
Upstream region at tRNA start position 
gacttcattC
tRNA gene sequence 
GGGGCCGTAGCTCAATTGGTTAGAGCATCGGACTGTCGATCCGAAGGTTGAGGGTTCGAG
ACCCTTCGGCCTCGTta
Downstream region at tRNA end position 
aacctaagtt
Secondary structure (Cloverleaf model)
>WENV170671892	Asp	GTC
                   C      GTta aacctaagtt
                     G - C
                     G + T
                     G - C
                     G - C
                     C - G
                     C - G
                     G - C          A G
                    T     T T C C C     A
      T A A        A      + | | | |     G
    T       C T C G       G A G G G     C
    G       | | | |                 T T
    G       G A G C
      T T A        A     AGGTT
                    T - A
                    C - G
                    G - C
                    G - C
                    A - T
                  C       A
                  T       G
                    G T C
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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