The detailed information of tRNA gene sequence


Sequence ID>WENV170671950
Genome IDLAHU01237914
Search identical group
Phylum/Class[LAHU] activated sludge metagenome; sample C-0; Zero hour mixed sludge faded in reactor as a methanogenic microbial inoculum from
Species
Start position on genome 540
End posion on genome 456
Amino Acid Leu
Anticodon GAG
Upstream region at tRNA start position 
aattagcaca
tRNA gene sequence 
GCAGGGGTGGTCGAGCGGTCAAAGGCGCTAGGTTGAGGGCCTAGTGGGTGAGTCCCTTCG
CGGGTTCGAATCCCGTCCCCTGCACtt
Downstream region at tRNA end position 
gtatgaactt
Secondary structure (Cloverleaf model)
>WENV170671950	Leu	GAG
                   a      ACtt gtatgaactt
                     G - C
                     C - G
                     A - T
                     G - C
                     G - C
                     G - C
                     G - C          T A
                    T     T G C C C     A
      C G A        G      + | | | |     G
    G       G C T G       G C G G G     C
    G         | + |                 T T
    T       A G G C
      C A A        G     TGGGTGAGTCCCTTC
                    C - G
                    T - A
                    A - T
                    G - C
                    G - C
                  T       G
                  T       G
                    G A G
Intron
Comment/Decision
Genome/Seq. Info.[ENA]

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